Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908151.1_cds_XP_016458255.1_51901
CDS Infomation

[gene=LOC107781950] [db_xref=GeneID:107781950] [protein=protein trichome birefringence-like 2 isoform X3] [protein_id=XP_016458255.1] [location=complement(join(200052..200394,201255..201413,201550..201740,201827..202019,202482..203172,203396..203402))] [gbkey=CDS]
Sequence

ATGGAAGTGAATGGAACAATTGAAGGAAGCATACATGAAGGGAACTTGTCTCAGATTGTG
AAAAATGGAAATCTTAATGTTGAAGAATCAGGGATTACTAAGAAAAGTCATGAATTAAAT
GGTTCTCAAGTTGATGGAAGTGGGAATTTTTCCAATTTTTCTGGGAAAGGAACAGTTTTG
GGGGAAAAGGGGGAAGTTTGGGGAAATACCCATGTGGGGAATTTCTTTGAGAATGTGAAA
AATGGAAGTTTTGTTGTTCAAGAATCAGGGATTCCCAAGAATACCCCTCAATTGAATGGG
ACACACATTGATGGAGATATAACATTTTCCAATTTTTCTGGTGCTAGTGATAGTGGTTCT
GTAAATAGTAATGTGGGCACTCCTACTTATGTTGAGGATGTTGGATCAAATGGTGAAAGA
AAAAAAGTTGCAGTGACTGAAGGTAAAGGGGGTGTATCTGTGGAGCAGTTTGGTGGAATT
GGTTCAAATGATGGAAAATCATTGACTGGACGCGGCAAGGACTTTTATGGGGATTGTGAT
ATATTTGATGGCGAATGGGTTAGAGATGACACGAAGCCACATTATCCTCCAGGTTCTTGT
CCTATTATTGATAGAGATTTTGATTGTCACCTTAATAAGAGGCCAGATGATGGGTATATC
AAGTGGAGATGGCAGCCATATGCATGTGATATACCGAGCCTCAATGCAACTGATTTTCTG
GAGAGATTGAGAGGGCAAAAGCTTGTTTTCGTGGGGGATTCTTTGAATAGGAACATGTGG
GAGTCCCTTGTTTGCATTCTTCGCCACAGTATCCGAGAAAAAAAGCGAGTTTATGAGATA
TCAGGGAGGCATGAATTCAAAAAGAAGGGCTTCTATGCATTCAGATTTGAGGATTATAAC
TGTTCTGTGGACTTTGTTAGCTCACCGTTTCTCGTCAGACAATCAGCTTTTAAGGGAAAG
AATGGTCCTTTCGAGACACTAAGATTGGATTTGATGGAAAAGACTACTTCAATGTATAGT
GACGCTGATATAATAATCTTCAACACTGGTCATTGGTGGACTCATGAGAAAACCTCCAGA
GGGGAAGATTACTACCAGGAAGGTAATCATGTGCATGCTAGGCTCAAGGTTTTAGAGGCG
TACAAGAGAGCGCTTTCCACTTGGGCAAGATGGGTGGATAAGAACCTTGATGGAAGCAGA
ACTCAAATTATTTTTAGAGGATATTCCGCCACTCACTTCAGGGGAGGTCCATGGAACTCA
GGCGGGCAGTGCCATAAAGAAACGGAACCAATATTCAAGAAGGCTTATTTAAAAAAGTAC
CCTTCAAAGATGAAAGTCCTACATCACGTGCTTCATAATATGACGACCCCTGTTATCTAT
ATGAACATTAGTAGGCTCACAGACTATAGAAAAGATGGTCACCCGTCGATATACAGAAAG
GAGTATAAGACAGTAGAAGAACAAATGGCGGGAGTGCACGCTCAGGATTGCAGTCATTGG
TGCCTACCAGGAGTACCGGACACTTGGAACGAGCTGTTATATGCATCTCTCCTGAAGAGC
AGAAAAGGTTTGTGGAAAAACTGA

Peptide Sequence

PEP ID

XP_016458255.1
PEP Infomation

PREDICTED: protein trichome birefringence-like 2 isoform X3 [Nicotiana tabacum]
Sequence

MEVNGTIEGSIHEGNLSQIVKNGNLNVEESGITKKSHELNGSQVDGSGNFSNFSGKGTVL
GEKGEVWGNTHVGNFFENVKNGSFVVQESGIPKNTPQLNGTHIDGDITFSNFSGASDSGS
VNSNVGTPTYVEDVGSNGERKKVAVTEGKGGVSVEQFGGIGSNDGKSLTGRGKDFYGDCD
IFDGEWVRDDTKPHYPPGSCPIIDRDFDCHLNKRPDDGYIKWRWQPYACDIPSLNATDFL
ERLRGQKLVFVGDSLNRNMWESLVCILRHSIREKKRVYEISGRHEFKKKGFYAFRFEDYN
CSVDFVSSPFLVRQSAFKGKNGPFETLRLDLMEKTTSMYSDADIIIFNTGHWWTHEKTSR
GEDYYQEGNHVHARLKVLEAYKRALSTWARWVDKNLDGSRTQIIFRGYSATHFRGGPWNS
GGQCHKETEPIFKKAYLKKYPSKMKVLHHVLHNMTTPVIYMNISRLTDYRKDGHPSIYRK
EYKTVEEQMAGVHAQDCSHWCLPGVPDTWNELLYASLLKSRKGLWKN

Transcript Sequence

Gene sequence data has not been registered.